bioinformatik.de - /Software/Prediction_of_Prediction_of_Transcription_Factor_Binding_Sites/
Category bioinformatik.de / Software / Prediction of Prediction of Transcription Factor Binding Sites /
AliBaba 2 - prediction of transcription factor binding sites by context dependent matrices generated from TRANSFAC 3.5 public sites.
http://www.alibaba2.com/
MatInspector professional is a tool that utilizes a library of matrix descriptions for transcription factor binding sites to locate matches in sequences of
unlimited length (free of charge for academic).
http://www.genomatix.de/software_services/software/MatInspector/matinspector.html