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Category bioinformatik.de / Databases / Metabolism and Regulation /

Biocarta - Charting Pathways of Life.
http://www.biocarta.com/

Biochemical Pathways, links to all maps of "Biochemical Pathways" in which this entry appears.
http://www.expasy.ch/cgi-bin/search-biochem-index

BRENDA is the main collection of enzyme functional data (started 1987). Data on enzyme function are extracted directly from the primary literature.
http://www.brenda.uni-koeln.de

CSNDB - Cell Signaling Networks Data base is a data- and knowledge- base for signaling pathways of human cells.
http://geo.nihs.go.jp/csndb.html

Enzyme - Enzyme nomenclature database.
http://www.expasy.ch/enzyme/

Enzyme EC numbers
http://www.genome.ad.jp/dbget-bin/get_htext?ECtable

KEGG: Kyoto Encyclopedia of Genes and Genomes
http://www.genome.ad.jp/kegg/

Ligand Chemical Database for Enzyme Reactions
http://www.genome.ad.jp/dbget/ligand.html

Pathguide: The Pathway Resource List
http://cbio.mskcc.org/prl/index.php

PlantsP - Genomics of Plant Phosphorylation.
http://PlantsP.sdsc.edu/

PROLYSIS, intended as a Web resource for those interested in proteases and their natural or synthetic inhibitors.
http://delphi.phys.univ-tours.fr/Prolysis/

Reactome is a curated database of biological pathways. It is a free on-line resource.
http://www.reactome.org/

SilicoCyte is an advanced, modular, flexible and highly integrated microarray analysis platform designed for automated image analysis, comprehensive data annotation, elaborate data analysis and advanced data visualization.
http://www.cytogenomic.com/

SoyBase: a soybean genetic database, contains reaction and pathway descriptions and diagrams for a number of basic metabolic pathways.
http://cgsc.biology.yale.edu/metab.html

SPAD - The Signaling PAthway Database is an integrated database for genetic information and signal transduction systems.
http://www.grt.kyushu-u.ac.jp/spad/

The University of Minnesota Biocatalysis/Biodegradation Database contains information on microbial biocatalytic reactions and biodegradation pathways for primarily xenobiotic, chemical compounds.
http://www.labmed.umn.edu/umbbd/index.html

TRANSPATH: Database on signal transduction pathways
http://www.biobase.de/pages/products/transpath.html

WIT-Pro (Public) - A web-based sample of the largest available and constantly curated genome database, with well over 240 genomes, that supports functional characterization of genes and interactive metabolic/cellular reconstructions.
http://igweb.integratedgenomics.com/IGwit/