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Arabidopsis Genome Resource (AGR) - a database developed at NASC using the ACEDB database system. Sequences, maps, and other information has been combined to form a large and powerful information resource.
http://ukcrop.net/agr/

BDGP - Berkeley Drosophila Genome Project.
http://www.fruitfly.org/

Bean Genes - A Phaseolus/Vigna Database
http://beangenes.cws.ndsu.nodak.edu/

C.elegans Genome Project.
http://www.sanger.ac.uk/Projects/C_elegans/

Caltech Genome Research Laboratory
http://informa.bio.caltech.edu/idx_www_tree.html

Completed Genomes at the EBI.
http://www.ebi.ac.uk/genomes/

Dog Genome Project
http://mendel.berkeley.edu/dog.html

E. coli Genome Center's Home Page
http://www.genetics.wisc.edu/

European Drosophila Genome Project (EDGP)
http://www.open.ac.uk/science/biosci/research/molecular-genetics/EDGPMap.html

Genome Monitoring Table - Genome-scale DNA sequencing: where we are?
http://www.ebi.ac.uk/~sterk/genome-MOT/

Genome Sequencing Centre Jena
http://genome.imb-jena.de/

HOBACGEN is a database system that contains all the protein sequences of bacteria organized into families.
http://biom3.univ-lyon1.fr/databases/hobacgen.html

Horse Genetics
http://www.vgl.ucdavis.edu:80/~lvmillon/

Humane Genome Sequencing Center
http://www.hgsc.bcm.tmc.edu/

INE - INtegrated rice genome Explorer - a database integrating the genetic map, physical map and sequencing information of rice genome.
http://www.dna.affrc.go.jp:82/giot/INE.html

Leishmania Genome Network
http://www.ebi.ac.uk/parasites/leish.html

Mosquito Genomics WWW Server
http://klab.agsci.colostate.edu/

NCBI's Clusters of Orthologous Groups (COGs) were delineated by comparing protein sequences encoded in 8 complete genomes,representing 6 major phylogenetic lineages.
http://www.ncbi.nlm.nih.gov/COG/

Pig and Chicken Genome Mapping Site
http://www.genome.iastate.edu/

RhizoBase - provides an easy way of accessing the sequcence and all-inclusive annotation data through image maps, keyword searches and the gene category list of Rhizobia.
http://www.kazusa.or.jp/rhizobase/

STACK is a database of reconstructed expressed human genes organised according to source of expression. It is the only database that is available along with the tools made to generate it.
http://www.sanbi.ac.za/Dbases.html

Stanford Human Genome Center
http://www-shgc.stanford.edu/

The Arabidopsis thaliana Database (AtDB) Project provides genomic and related data about Arabidopsis.
http://www.arabidopsis.org/

The Genome Database GDB. An international collaboration in support of the Humane Genome Project, providing a curated encyclopedia of human genomic and mapping information.
http://www.gdb.org/

The Mouse Genome Informatics (MGI) resource comprises the Mouse Genome Database, the Gene Expression Database and the Encyclopedia of the Mouse Genome.
http://www.informatics.jax.org/

The NCBI Reference Sequence project (RefSeq) will provide reference sequence standards for the naturally occurring molecules of the central dogma, from chromosomes to mRNAs to proteins.
http://www.ncbi.nlm.nih.gov/LocusLink/refseq.html

The Schizosaccharomyces pombe Genome Sequencing Project
http://www.sanger.ac.uk/Projects/S_pombe/

TIGR - The Institute for Genomic research
http://www.tigr.org/

UK CropNet has been established as part of the BBSRC's Plant and Animal Genome Analysis special initiative. The networks focus is the development, management and distribution of information relating to comparative mapping and genome research.
http://ukcrop.net/

University of Washington Genome Center
http://www.genome.washington.edu/UWGC/

ZEBRAFISH GENOMICS PROJECTS
http://zfish.uoregon.edu/zf_info/genome.html